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Equipment

10X Chromium X

  • Single cell and single nuclei library preparation instrument
  • Single cell transcript analysis with probe based or species-agnostic protocols
  • Single cell ATAC-seq profiling of open chromatin
  • Combined multiomic single cell transcript and ATAC-seq assay

AVITI Short Read Sequencing

  • Short read sequencing with AVITI technology by Element Biosciences
  • Sequencing of Illumina-style DNAseq and RNAseq libraries
  • 1x150, 2x75, 2x150, 2x300 and other read formats
  • Flow cell outputs from 100M to 1,000M reads or read pairs
  • Outputs Illumina-style fastq files useable by existing informatics pipelines

Covaris M220 Focused Ultrasonicator

  • Shear DNA for preparation of short read sequencing libraries
  • See the common use equipment page for information about using the Covaris M220

Nanopore Long Read Sequencing

  • Long read sequencing with Nanopore technology from Oxford Nanopore
  • Long read sequencing of DNA, cDNA, RNA and amplicons
  • Sequencing performed with nanopore technology
  • PromethION P2 flow cells generate up to 150 Gbp

Qubit

  • Fluorometric quantification of DNA and RNA
  • See the common use equipment page for information about using the Qubit

Qubit Flex

  • Fluorometric quantification of DNA and RNA
  • Assays eight samples at a time
  • Available for projects with 72 or more samples

TapeStation

  • Automated electrophoresis of DNA and RNA for quality control
  • RNA integrity scores for total RNA samples
  • Precisely determine insert size distributions of sequencing libraries
  • Calculate DV200 scores for QC of RNA from fixed tissues