Equipment
Thermo Scientific Q-Exactive with EASY nLC1200
The Thermo Scientific Q-Exactive coupled with the EASY-nLC1200 UPLC provides a robust high resolution/accurate mass LC/MS/MS platform for protein and peptide identification and quantification.
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Thermo Scientific Excedion Pro with Vanquish NEO UPLC
The Thermo Scientific Excedion Pro with Vanquish NEO UPLC represents the latest generation of high resolution/accurate mass hybrid mass spectrometers. Equipped with an extended mass range (up to 12,000 m/z) and EASY EThcD alternative fragmentation the Excedion Pro offers exceptional performance for proteome mapping, PTM analysis and quantification.
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Software:
- Mascot Distiller
- MaxQuant/Perseus
- DiaNN
- Skyline
- Scaffold
- Mascot, Andromeda, MSFragger search algorithms